PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016652732.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 242aa    MW: 26888.9 Da    PI: 5.1784
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016652732.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.90.000421922281354
                     HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH  13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     R+++++    Lr ++P  +       ++ +++L +Av+Y+ksL
  XP_016652732.1 192 RQKMKKMVRVLRGIVPGgN------EMNTVDVLDEAVQYLKSL 228
                     7889999999999999855......8***************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.582179228IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-4186234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.16E-6189233No hitNo description
Gene3DG3DSA:4.10.280.106.1E-7190239IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.88E-8192238IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MQRDQQFDPN KAAPPFANQV GNNYMHIPVA SARGAVLPHE AKHIKPFHGV EFQTSDICPK  60
NFIIFDQTDH RSQIMFNPAI AHKITGPAFN ICAAYVQDNL GLNEGNNEDR ETSSSLKEDS  120
DDIDALLSLE EEELEEYDEE EVSTARTHGN YGSMSPDSCS NYGLKTKKNR QCSSLGKSSG  180
IGSSSCNSER KRQKMKKMVR VLRGIVPGGN EMNTVDVLDE AVQYLKSLKV ELQHLGVENL  240
ND
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008245935.10.0PREDICTED: transcription factor bHLH144-like
RefseqXP_008245936.10.0PREDICTED: transcription factor bHLH144-like
SwissprotQ9ASX94e-47BH144_ARATH; Transcription factor bHLH144
TrEMBLM5WH370.0M5WH37_PRUPE; Uncharacterized protein
STRINGVIT_10s0003g02940.t012e-97(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.23e-33bHLH family protein